Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825368.1_cds_XP_016502297.1_15952
CDS Infomation

[gene=LOC107820520] [db_xref=GeneID:107820520] [protein=exocyst complex component EXO84A-like] [protein_id=XP_016502297.1] [location=complement(join(86596..86893,87234..87370,87722..87907,88077..88505,88871..89918,90011..90108,90778..90948))] [gbkey=CDS]
Sequence

ATGGACACGGTTACTGCTTCTTCAACATCAAGAAGGTTTAGGTTTAGGGATCACAGTCAA
GATATCCCCGCCGATCAACATTATTCAACCGATGCTCATTCCAGCGATGACTCTTCGTCT
GTTTCCAGCGAACTTAATTCTGATCATGAGCTCCACTCCATGACTGCTAAGGGCATTACT
CATCTTTGTTCAGAACTCCTTGAGTTGAAAAGAGAGTCTGAGGAAGATTTTCAGAAAATT
GTCTTTACCAATTATTCAGCATTTATAGGGATATTTGAAGGGACTAAAAATCTAGAGAGT
GACTTATTGCAACTGAAGTACCAGGTTTCAAAGCAGAAAAGGCTCATAAAAGACCTTGCA
AATCGCGATTTTCTAAAGTTTCTTGCAGAGGAGACGATAGAATCAAAGCTCGAAGAAAGC
TTACCAGATGACACATCTTTGTCCAGCATTATTGCTGCTCACACCAAAGAGGTCTCTGAA
ATATTGGATGATCTTCTTTCAGAACAGCGATTGGACGAAGCTATTTCTTTCTTGGAGAAG
GAAGCTGAGTTCTTCAAAGATTTCAAGTTGGCAGAGACTTCATCGGATGAACTCCTGGGC
TATAACTCTAGAATATCAGAGAAGAGGTCTATGATTGCAGATCAGTTGACACTGGTTGCT
AAAAATCCTAGAGTTTCTGCACTTGAACTGCAGAAAGCATTGGTTGGGCTCCAAAGAATT
GGTGACAGTAATCTTGCAACTCAACTATTGCTTAAATATTATCATTCACGTATTGCATCT
AGCACACATGATTTGTTTTTCTCAAAGGTATATCCACATGGACTATATCTTGGAGATGTC
TCGAAGTTTTTATTTTCCATGATCTCCCAAGCAGCTAAAAGTTTCACTCTCTTGCATGGT
GAGAATTCTTCTTACGAATCAGAATTACATCGGTGGGTGATGGAACAAACTGCGACTTTT
GCTGTGTATTTCAATAATTATGTTATATCCATGGTAGAGCCAAGTAGTGGCCTATCGACA
GCAGTGGAAGCTGTGCAATCTACAATGTCTTATTGCTCTTTGTTAGAGGCACAGGGAATT
GAATTACGATCATCTTTGATAGAGCATATCCGTCCCAGTATACAAGAAGTTTTACAGATC
CATATAGAACACTTTAAGAAAGTGATTGGTATCATTACCTCATCTGATACTTGGGTTCTT
GGAAGGTATCGAGTATCAGGAATTCTATCACCTGATAGTTATTCCGCTAACAGTGGCCAG
CTATCGGAGTATTGTCTGCTTGCAAACAGTGGTCGGAAGTTCATAACACTAAGTCAGGCT
ATAATTGAAGAGGTTTCTCCTCTAATCGAACTGCATATTGAAGGCTCACTTCTGAGAGGG
CTTTTGGATCTTTTTACAGAGTACACTACTATTCTCGAAAGTGCACTAACCAATCAGACA
GAAAGTGAGGGAGTTGATTCAAGAATCAATATTGCAGATTCAGTAGAACAACAAATTTCC
CTTATTGCTAACTTATCAATAATAGCACAAATATTCTCCAGCATGATTAGGAGGGCTTTC
AATGACACCTACCACTTGCAGTTTGAGATTGATGATTATGAGCTCTTCATTCATGAAAAC
TGTGAGCGACTAAGATCTCAATTCTGCAAGCAATTAATTCTTAAATCCTTGCCACTTGAA
AGTGATTATAGATGTAATCCTTCTCCAGCATGTTGTACTGATCTAGAGTCCTCTTCTTCT
TACCGGGAATTGTATTTCGCGCTAAGGAATCTAAAAGAGCACGCTGAGGACACTCTTATC
AAAATGAATTGGTTAAAGGATCTATTCAGTGAGCTGATGGAGATGATGTTTGAGATGATT
TTGGATAAAGAAGATATTTCCAATATCACTAAAGAGCATTTGCCAAATAAAAGTTGTGAC
AAGTTTGTACAGCTTACACTTGACATCCACTTTCTCCTTGAAATTGCTAAATGGGGAGGA
TACTTGTCTGATACCGTCATGAATGCCTATTCGGATTATGAATCTCGTACAAAATCTGCA
TTCCTCTCTGCTGGGATGGATCCTGAAAGGCACATGAGCTATATTGGATGGGCGACAAGG
GCTGCTATTGAAACACTAGAGAAGCTGCATGAACTTGATAAAAGGGAAATGCTTAGCAAT
GAGATTATTGATGCTACTGAAGATGAAACAAATGAATCTAGTTTACACAACTCTACTGAA
TCATTTGGGAGCAACGATGCTACTAACTCGGTAGAGGTATTAAGACCCCTGGATGCACCA
GAGGTTACATCTTGTACCAAGATTCTGGAAACATGTGTTGTGCCTAAGGAAGGTGATGAA
GAAAAAAATGGCCTTCATCATATATAG

Peptide Sequence

PEP ID

XP_016502297.1
PEP Infomation

PREDICTED: exocyst complex component EXO84A-like [Nicotiana tabacum]
Sequence

MDTVTASSTSRRFRFRDHSQDIPADQHYSTDAHSSDDSSSVSSELNSDHELHSMTAKGIT
HLCSELLELKRESEEDFQKIVFTNYSAFIGIFEGTKNLESDLLQLKYQVSKQKRLIKDLA
NRDFLKFLAEETIESKLEESLPDDTSLSSIIAAHTKEVSEILDDLLSEQRLDEAISFLEK
EAEFFKDFKLAETSSDELLGYNSRISEKRSMIADQLTLVAKNPRVSALELQKALVGLQRI
GDSNLATQLLLKYYHSRIASSTHDLFFSKVYPHGLYLGDVSKFLFSMISQAAKSFTLLHG
ENSSYESELHRWVMEQTATFAVYFNNYVISMVEPSSGLSTAVEAVQSTMSYCSLLEAQGI
ELRSSLIEHIRPSIQEVLQIHIEHFKKVIGIITSSDTWVLGRYRVSGILSPDSYSANSGQ
LSEYCLLANSGRKFITLSQAIIEEVSPLIELHIEGSLLRGLLDLFTEYTTILESALTNQT
ESEGVDSRINIADSVEQQISLIANLSIIAQIFSSMIRRAFNDTYHLQFEIDDYELFIHEN
CERLRSQFCKQLILKSLPLESDYRCNPSPACCTDLESSSSYRELYFALRNLKEHAEDTLI
KMNWLKDLFSELMEMMFEMILDKEDISNITKEHLPNKSCDKFVQLTLDIHFLLEIAKWGG
YLSDTVMNAYSDYESRTKSAFLSAGMDPERHMSYIGWATRAAIETLEKLHELDKREMLSN
EIIDATEDETNESSLHNSTESFGSNDATNSVEVLRPLDAPEVTSCTKILETCVVPKEGDE
EKNGLHHI

Transcript Sequence

Gene sequence data has not been registered.